Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923454.1_cds_XP_016472050.1_64320
CDS Infomation

[gene=LOC107794104] [db_xref=GeneID:107794104] [protein=ubiquitin domain-containing protein DSK2b-like isoform X3] [protein_id=XP_016472050.1] [location=join(31377..31632,33061..33804,34314..34522,34661..34774,35921..35979,36300..36328,38727..38875)] [gbkey=CDS]
Sequence

ATGGGCGGAGGCGATACTACTACTACAACGGTCAAAGACGAAGTAGCCGAGAATAACGCC
GGCGGTGGTGGTGAAACAGTTACGATCAACGTTCGATGTTCCAACGGCTCCAAATTCTCC
GTTCAAGTGAGCCTCGATTCCACCGTCGGATCATTCAAGTCCGTCCTTTCTCAGCCGTCC
GATATCCCTGCCGAACAGCAGAGGTTGATCTATAAAGGCCGGATCTTAAAGGACGACCAA
ACCCTAACAAGCTACGGTCTGGAGGCAGATCACACAGTTCATCTGGTTCGAGGTTTTGCC
CCAGCTGCTTCCGCTAGTGCAACCAATGCTGGAAATCCAAATACTAATCAGAATATACCA
GGGGATGCCCCGCCAAATGTAGGGGGGCCATTTGCAGGAGTAGGTGGAGCTCCACTCTTT
CCCGGACTTGGAAGTGGTGGTGGTCCGTTTGGAGCTGGTCTTCCAGATTTTGAGCAGGTC
CAGCAGCAGCTGACTCAAAACCCCGACATGATGAGAGATATGATGAATATGCCTCTTGTT
CAGAATCTAATGAATAACCCAGAAATCATCCGCAACTTGATTATGAACAATCCTCAAATG
CGAGAGATCATGGATCGTAATCCCGAGCTCGCTCACATACTCAATGACCCTTCTACTCTT
CGCCAGACAATGGAGGCTGCACGAAACCCTGAAATTATGCGTGAGATGATGCGCAATACT
GACAGGGCAATGAGCAACATTGAATCCTCTCCTGAGGGATTTAACATGCTAAGGCGCATG
TATGAAAATGTTCAAGAGCCATTTCTGAATGCAACAACCATGGCTGGAGATACAAGAAAT
GATTCAGGGGCAAACCCGTTCGCAGCTCTTTTGGGAGCCCAAGGTGGGGGGCAAGGCAGA
AATCAGGCAACTAGTCCTCCAGTTACTGGTTCTGAGACAACTGCTAATCCTCCCGCTCCC
AATACTAATCCACTTCCGAATCCTTGGGCATCAGCTGGCACTGGAGCCGCCCAAACGAAT
ACCACTGCTAGGTCAAATGCTGCTGCGGATACTAGGGCGCCCCCTCTTGGTGGCTTGGGC
GCTTTGCCAGATTTGCAGCAAATGCTAGGTGGCATGCCTGATGCCTCTTCTCTAAATCAG
TTAATGCAGAATCCAGCCATCTCACAGATGATGCAGTCTCTCCTCTCAAATCCTCAGTAC
ATGAACCAGATTTCTGGGCTCAACCCACAGCTAAGAAGCATGCTTGATTCCAACCCCCAT
CTCAGAGAAATGATGCAAAACCCTGAATTTATTCGTCAGTTGACGTCCCCTGAGACAATG
CAGCAAGTTATGACTTTACAGCAAGGGCTGTTGTCTCAACTTGGTCGGCAGCAAACAAAC
CAAGGACAGGGTCAAGATGCTGGCCGAACAGTGCCCCCAGAGGAATTATACGCCACTCAG
TTAGCCCAGTTACAAGAAATGGGTTTTTTTGACACTCAAGAAAATATCCGGGCACTTATT
GCCACTGCAGGGAATGTGCACGCTGCGGTAGAGCGACTTCTAGGGAACACTGGACAGTAG

Peptide Sequence

PEP ID

XP_016472050.1
PEP Infomation

PREDICTED: ubiquitin domain-containing protein DSK2b-like isoform X3 [Nicotiana tabacum]
Sequence

MGGGDTTTTTVKDEVAENNAGGGGETVTINVRCSNGSKFSVQVSLDSTVGSFKSVLSQPS
DIPAEQQRLIYKGRILKDDQTLTSYGLEADHTVHLVRGFAPAASASATNAGNPNTNQNIP
GDAPPNVGGPFAGVGGAPLFPGLGSGGGPFGAGLPDFEQVQQQLTQNPDMMRDMMNMPLV
QNLMNNPEIIRNLIMNNPQMREIMDRNPELAHILNDPSTLRQTMEAARNPEIMREMMRNT
DRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGDTRNDSGANPFAALLGAQGGGQGR
NQATSPPVTGSETTANPPAPNTNPLPNPWASAGTGAAQTNTTARSNAAADTRAPPLGGLG
ALPDLQQMLGGMPDASSLNQLMQNPAISQMMQSLLSNPQYMNQISGLNPQLRSMLDSNPH
LREMMQNPEFIRQLTSPETMQQVMTLQQGLLSQLGRQQTNQGQGQDAGRTVPPEELYATQ
LAQLQEMGFFDTQENIRALIATAGNVHAAVERLLGNTGQ

Transcript Sequence

Gene sequence data has not been registered.